rs32364197 SNP Detail

Summary

• ID
  rs32364197
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156046422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTT TCCCAGGGCC CTTTTTTGTG
  K
  TTTAGGGTGG GGTCTGAAGG AGGTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45638951	mCV22553941	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss148122614	ENSMUSSNP2669001	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321444092	CHEV_4_155336074	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32364197					SNP	G	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156046422 () rs orientation: forward

Symbol	Name	Function Class
C1qtnf12	C1q and tumor necrosis factor related 12	353 bp upstream
Cpgi15495	CpG island 15495	339 bp proximal
Gm42365	predicted gene, 42365	779 bp upstream
Gm68249	predicted gene, 68249	within coordinates
Rr606619	regulatory region 606619	within coordinates
Rr606620	regulatory region 606620	1148 bp proximal
Rr606621	regulatory region 606621	1456 bp proximal
Tssr40744	transcription start site region 40744	327 bp upstream
Tssr40745	transcription start site region 40745	377 bp upstream
Tssr40746	transcription start site region 40746	446 bp upstream
Tssr40747	transcription start site region 40747	576 bp upstream