rs32365443 SNP Detail

Summary

• ID
  rs32365443
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:81821722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCA ACTGGCTGGA GGGATGGCTC
  Y
  GTGTTATTTT TGCCTTTATG CCACC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39394515	mCV23250520	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	C
ss148228340	ENSMUSSNP5103777	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
ss325032911	CHEV_15_81767951	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32365443					SNP	T	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:81821722 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7402	CpG island 7402	427 bp distal
Csdc2	cold shock domain containing C2, RNA binding	within coordinates
Gm62067	predicted gene, 62067	813 bp upstream
Rr506350	regulatory region 506350	824 bp distal
Rr506351	regulatory region 506351	752 bp distal
Rr506352	regulatory region 506352	within coordinates
Rr506353	regulatory region 506353	927 bp proximal
Tssr132315	transcription start site region 132315	682 bp downstream
Tssr132316	transcription start site region 132316	647 bp downstream
Tssr132317	transcription start site region 132317	621 bp downstream
Tssr132318	transcription start site region 132318	587 bp downstream
Tssr135513	transcription start site region 135513	805 bp upstream