rs32371892 SNP Detail

Summary

• ID
  rs32371892
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19307367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCGCGCCGCC GCCACCGCCG CCGCCCAGGG CCGGGCAGGC
  GCCGAGCCCC GACTGCCTAG TTTCCGCCCG CGCAACCTCA GCAGAGGTCC GGATGGGCAC
  M
  GAGTCCGGAG CTCCTGAGTT CCGCCCCCGC CCCGCGCCTC CACTTTCCCC ACATGTTCAT
  CGGCCTCTCC AGGGCACGCG ACCAGGGCTG GTCTCTGCC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
ss46137441	mCV25052840	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss48163418	NES11821956	PERLEGEN	MM_PANEL2	f	SNP	C		C	A		A	C
ss148479096	ENSMUSSNP3180585	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss322117466	CHEV_7_20158791	CHEVERUD	SCREENING_POP	f	SNP					C			C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
rs32371892					SNP	C	A	C	A	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48163418	NES11821956	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19307367 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18500	CpG island 18500	within coordinates
Gemin7	gem nuclear organelle associated protein 7	99 bp upstream
Rr380485	regulatory region 380485	within coordinates
Rr643193	regulatory region 643193	485 bp distal
Rr643194	regulatory region 643194	within coordinates
Rr643195	regulatory region 643195	195 bp proximal
Tssr70933	transcription start site region 70933	79 bp upstream
Tssr70934	transcription start site region 70934	65 bp upstream
Tssr70935	transcription start site region 70935	39 bp upstream
Tssr70936	transcription start site region 70936	351 bp downstream