rs32372192 SNP Detail

Summary

• ID
  rs32372192
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:48532629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGGTGCA AAGGGAATGC
  ACACTGGGCA GAGGTCTAGG TGATGAGCCA GGGTCTTCTT CCTGAGGGTG GCTTCCAAGA
  TGCTGCCACA TCTTTGTGTC TCTCTGTTCA GTTCTAGTAG CTATCAGAAG CTCCGGTGCT
  CAGGGTCACC CAAGTGTTCC TCAAGACCAG GACTGGACCT GAATATTCAC GTGCTATACA
  Y
  AGGGGCTGGC TGGCTGTAGC ATCGGATGTA AAATAAAAAT CCGTCATGAG GCAGGACAGG
  ATGCTTACAG AACAGATACA TCTTTACTGA GCAGGGACTA AGTTTAAATA TATCACCAAG
  AAGTAGTGTG TGGGCTTCTG TCTAAGCCAC TGTCTGTCAG GCTACTTGTC AAATCTTTCA
  CCTGTCAGTG CTTAGCGCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46137354	mCV23857820	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T	T
ss149208220	ENSMUSSNP3631215	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32372192					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:48532629 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19137	CpG island 19137	408 bp distal
E2f8	E2F transcription factor 8	1285 bp upstream
Gm2788	predicted gene 2788	within coordinates
Rr400335	regulatory region 400335	1634 bp downstream
Rr400336	regulatory region 400336	931 bp downstream
Rr646937	regulatory region 646937	1851 bp distal
Rr646938	regulatory region 646938	1497 bp distal
Rr646939	regulatory region 646939	1296 bp distal
Rr646940	regulatory region 646940	795 bp distal
Tssr66768	transcription start site region 66768	1516 bp downstream
Tssr66769	transcription start site region 66769	1015 bp downstream
Tssr66770	transcription start site region 66770	1928 bp upstream
Tssr72630	transcription start site region 72630	1891 bp upstream
Tssr72631	transcription start site region 72631	1851 bp upstream
Tssr72632	transcription start site region 72632	1831 bp upstream
Tssr72633	transcription start site region 72633	1262 bp upstream
Tssr72634	transcription start site region 72634	1210 bp upstream
Tssr72635	transcription start site region 72635	527 bp upstream
Tssr72636	transcription start site region 72636	454 bp downstream