rs32372437 SNP Detail

Summary

• ID
  rs32372437
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131646489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGGCCTC TGGCCAGCCA
  CACATCTGCA GAGACAGGAT GAACCCCCAC CCCCAGCCCC CAGCCTGGGA GGTCCCTCTG
  CAGGGGAGGC CTGTGGGAAG GGAGGCCTGC CTCCCCGTCC TGGTTTCCTA TCTTCCTGCT
  TGTTACACTT TCTCTGAGCT CTCAGAGAGA ACCAGAGCCA GGGTTCTACC TGGGAAAGGG
  R
  CCTGTAGTCA CCACCCCCCT CACAGCTCAG CCCAATGCCT GAGGCAGTAG TCAGAGGACA
  GGCAGGCTGA TGTCGAGCAC TTTGCTCCAG GTGTTCAACA TGTGTGCGAG CATTTCAGCT
  CTGAGAACAC ACTGTGGTGC TATTTGTTCT TATAAAGATA GGGAAACTGA GCCCTGGTGA
  GCTTAGGTGT GCTCTCCTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss45639955	mCV22587448	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss147471959	ENSMUSSNP3212513	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs32372437					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131646489 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14947	CpG island 14947	533 bp proximal
Gm12992	predicted gene 12992	within coordinates
Gm50475	predicted gene, 50475	1638 bp downstream
Rr85750	regulatory region 85750	1889 bp distal
Rr85751	regulatory region 85751	1289 bp distal
Rr100128	regulatory region 100128	within coordinates
Tssr39357	transcription start site region 39357	1390 bp upstream
Tssr39358	transcription start site region 39358	1972 bp upstream
Tssr43616	transcription start site region 43616	1524 bp downstream
Tssr43617	transcription start site region 43617	1841 bp downstream