rs32374047 SNP Detail

Summary

• ID
  rs32374047
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:147000076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATC TTTTTACAGG AGACAAATTT
  Y
  TTCCTGGGTC TACTCAGAAT CACGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45807984	mCV22898651	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss144663740	ENSMUSSNP4574924	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss321714914	CHEV_5_147874842	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32374047					SNP	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:147000076 () rs orientation: forward

Symbol	Name	Function Class
Lnx2	ligand of numb-protein X 2	within coordinates
Rr399514	regulatory region 399514	34 bp upstream
Tssr54497	transcription start site region 54497	28 bp downstream