rs32374814 SNP Detail

Summary

• ID
  rs32374814
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18999178 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGTAGGGT CCATAAGGCT TGAGCTGGCG ACCAGAGAGC
  TTGCTCGAGG TCCTGGGCTC AGCCTCTACA GCCTTAATCA AAAGTGGATA CAGGCCGACT
  R
  GAAAGGACAG AGCTGCCAGG ACTAGCAGAC GGCCCGGGAG TGAGCCGAGA ACAGCCTCTG
  CCTGGCCTTA GTTTCCCTAT CTCTACCACC TCTCCACCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	SM/J
ss46138016	mCV25048901	ABI	CRAMUS_MOUSE	f	SNP	G	G	G		A		G
ss48162359	NES11801546	PERLEGEN	MM_PANEL2	f	SNP			G	G		G	G	A		A
ss148471794	ENSMUSSNP2652693	ENSEMBL	ENSEMBL_Sanger	f	SNP			G				G
ss322116784	CHEV_7_19850602	CHEVERUD	SCREENING_POP	f	SNP									G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	SM/J
rs32374814					SNP	G	G	G	G	A	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48162359	NES11801546	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18999178 () rs orientation: forward

Symbol	Name	Function Class
Tssr64812	transcription start site region 64812	1043 bp upstream
Tssr70883	transcription start site region 70883	770 bp upstream
Tssr70884	transcription start site region 70884	425 bp upstream
Tssr70885	transcription start site region 70885	736 bp downstream
Tssr70886	transcription start site region 70886	1289 bp downstream
Vasp	vasodilator-stimulated phosphoprotein	within coordinates