rs32375774 SNP Detail

Summary

• ID
  rs32375774
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136146257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCACACCAGG GAGGCTGGGG CAGGAGGATG GTGAAGGCCA GGCTAGGCCA GGCTAGACTA
  CATCGGGAAC CCCTACCTAC AAACAAACAA CAACAGTTAG TTGGGAGCCT GCAGAGAGCT
  TCTTCATCAT TCGTAAGGCC CTGGGTTCCA GCCCAGCTGT GCCCCACAAT GAAACAGCCC
  TAAATACAAA CACGTTCATG TGCCTTCATC TTACTTCATA TGTCACACCT GACAAGGGCT
  TCCTTAAGGA AGGAAGGAAG GAAGGAAGGA AGGAAGGAAG GAAGGAAGGA AGGAAGGAAG
  R
  AAGGAAGGAA GGTTGGTTTT GCTTCGGTTC ACAGTCTAAG GTGCAGTCTA AGGTGCGGTC
  CATTATGTAG GAAGGCTTGG AGGCAGGAGG ACGAGGTAGC TGGTCACAGC ACATCTGCAG
  TCGGGTAGCA GACAGAAATG AATGCTGGTT ACCAGTTCAC TTCTAGCACA GGACCCTGGT
  CCATGGCAAG ATGTCACCCA CACTTCCTTT CCACTTCCGG TGGCATTGCT TAGTGCACGG
  GGTGGGGGTG GGGGCACGGA TCACTATATT ATTGTTTATG TATTTGCTTG TTTTGCAACA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45140620	mCV24740061	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss145554227	ENSMUSSNP518206	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32375774					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136146257 () rs orientation: forward

Symbol	Name	Function Class
Gm26568	predicted gene, 26568	within coordinates
Inava	innate immunity activator	within coordinates
Tssr229	transcription start site region 229	1865 bp downstream