rs32375980 SNP Detail

Summary

• ID
  rs32375980
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:13132110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGGT TATATAGTGA GACCCTTTTT
  W
  AAAACAGAAA ACAGAGAGAC AGAGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45140391	mCV23066266	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	A
ss148615015	ENSMUSSNP2471716	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		A
ss319642043	CHEV_1_13051967	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32375980					SNP	T	T	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:13132110 () rs orientation: forward

Symbol	Name	Function Class
Gm5250	predicted gene 5250	139 bp upstream
Gm37162	predicted gene, 37162	1935 bp upstream
Rr370874	regulatory region 370874	1291 bp downstream
Tssr12	transcription start site region 12	1179 bp upstream