rs32377688 SNP Detail

Summary

• ID
  rs32377688
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:161802406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGG ACATGTGACC ATGGCCTATA
  Y
  ATTACTAAAG GTCTACATTA CTATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45141690	mCV24531170	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss145926262	ENSMUSSNP6373146	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32377688					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161802406 () rs orientation: forward

Symbol	Name	Function Class
4930558K02Rik	RIKEN cDNA 4930558K02 gene	Intron
Gm38304	predicted gene, 38304	within coordinates
Pigc	phosphatidylinositol glycan anchor biosynthesis, class C	1402 bp downstream
Rr396470	regulatory region 396470	1606 bp upstream
Rr421879	regulatory region 421879	1087 bp proximal
Rr421880	regulatory region 421880	1697 bp proximal
Rr421881	regulatory region 421881	1763 bp proximal