rs32379674 SNP Detail

Summary

• ID
  rs32379674
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:146998319 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCAGGAGCC AGGGCTACAC AGAGAAACCC TGTCTCGAAA
  AACTAAAAAA AAAAAAAAAA AAAAAAAAGA CTGGCAGTTA GACGACTCCA TCCACCCATC
  C
  ATCCATGTCC GTAGAACCCT GGAGATTCCC AGACCCTCTG GAACGACACT TGGACATTTC
  TGAAGACATT CACTCCCCTC CAGGGCTGAC GTTCTATTC                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss144663640	ENSMUSSNP2370051	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs32379674					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:146998319 () rs orientation: forward

Symbol	Name	Function Class
Lnx2	ligand of numb-protein X 2	within coordinates
Rr399514	regulatory region 399514	1791 bp upstream
Tssr54497	transcription start site region 54497	1785 bp downstream