rs32382416 SNP Detail

Summary

• ID
  rs32382416
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100945848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAGG TGGCTTGACT GTGGGCCCTA
  Y
  TGTCTCATCC CTTCTGGGAG CCACG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39396186	mCV25401754	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss148481904	ENSMUSSNP4988181	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss325085113	CHEV_15_100878398	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32382416					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100945848 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7763	CpG island 7763	355 bp distal
Rr509881	regulatory region 509881	1119 bp distal
Rr509882	regulatory region 509882	80 bp distal
Tmdd1	transmembrane and death domain 1	570 bp upstream
Tssr136507	transcription start site region 136507	591 bp upstream
Tssr136508	transcription start site region 136508	582 bp upstream
Tssr136509	transcription start site region 136509	563 bp upstream
Tssr136510	transcription start site region 136510	538 bp upstream