rs32382929 SNP Detail

Summary

• ID
  rs32382929
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152389693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCAAACT GCTGCTGCTG
  CTGGGCATAT TCAGCTGCCG GGTCTGCAGG TCTGTCCCAC CAGTACTCAG AGGTCCCTGG
  GAAGGAAGCC GGGATGGAGG GTGTGGCTCT GGCCAAGAGG ATGGTGAAGG TTAATATGAA
  GGTTAATATG AGTGAGTGCT CAATATTGAG ATACTGTAGG ACCTTGTCAG GCTGGAGAGA
  R
  CAGGCAAGTG GCTGGTTCTG TGTTGTAATG CAGCCAGAGT TGACAGAACC TCGGGGGCTG
  GGTAAATGAA TTCTAGCTTA TTCTTGACAT AATAGACAGG CATTCTATCA GCAGGGAGGT
  GACCCCAGTA CCAGTTCCTC CACCAAAACT GTGAGATTCC AGAAGCCTCA AAGACGTGTG
  CCCTGGTTTG TAGTAAGCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45641807	mCV23461741	ABI	CRAMUS_MOUSE	f	SNP	G	G	A					A		A
ss46737993	NES11004694	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A		A	A	A	A	A		A	A	A	G
ss148080488	ENSMUSSNP682688	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A							A				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32382929					SNP	G	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46737993	NES11004694	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152389693 () rs orientation: forward

Symbol	Name	Function Class
Gm70210	predicted gene, 70210	within coordinates
Icmt	isoprenylcysteine carboxyl methyltransferase	within coordinates
Rnf207	ring finger protein 207	1783 bp downstream
Rr605836	regulatory region 605836	1665 bp distal
Rr605837	regulatory region 605837	167 bp distal
Tssr44828	transcription start site region 44828	27 bp downstream
Tssr44829	transcription start site region 44829	35 bp downstream