rs32384404 SNP Detail

Summary

• ID
  rs32384404
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117912523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAC CAGCCTGAGG GCACTGCGCA
  K
  AATAAGCTTC TCTGGAGAAG CTGGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45642012	mCV24294409	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss147298654	ENSMUSSNP6077690	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss321281387	CHEV_4_117727931	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32384404					SNP	G	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117912523 () rs orientation: forward

Symbol	Name	Function Class
Rr598293	regulatory region 598293	1086 bp distal
Rr598294	regulatory region 598294	285 bp distal
Rr598295	regulatory region 598295	1880 bp proximal
St3gal3	ST3 beta-galactoside alpha-2,3-sialyltransferase 3	within coordinates
Tssr43029	transcription start site region 43029	571 bp upstream