rs32384999 SNP Detail

Summary

• ID
  rs32384999
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:78136080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCT GATGAGCGTT AACCAAGCAG
  Y
  GCTGTGGGGA GCCTCTGTTC TGAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss39397057	mCV27572895	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss148180844	ENSMUSSNP1765938	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
ss325024226	CHEV_15_78082310	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs32384999					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78136080 () rs orientation: forward

Symbol	Name	Function Class
Ncf4	neutrophil cytosolic factor 4	Intron
Rr505232	regulatory region 505232	50 bp distal
Rr505233	regulatory region 505233	37 bp proximal
Tssr131902	transcription start site region 131902	1251 bp downstream
Tssr131903	transcription start site region 131903	978 bp downstream
Tssr131904	transcription start site region 131904	1341 bp upstream
Tssr131905	transcription start site region 131905	1392 bp upstream