rs32385255 SNP Detail

Summary

• ID
  rs32385255
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43088878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCTGGAGAA CAGCTACGAA GGGACAAGGC TTGGGGTCAG
  AGGCACAAAG CAAGCAAGGA AAGCACTTGA GACTCTGGTC TGACAGAGAC GGCAGAGCCA
  Y
  CACAGGTTTG ATGGAAGCCC ATGATCTTGG AGGCCATGTG GTTGAGTGGC CATGGAGGAG
  AGCCAAAAGC AGGTGAGGTT CCTATCTGGG GACCAGATG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46139018	mCV22666103	ABI	CRAMUS_MOUSE	f	SNP		C	T					T	C
ss51478216	NES13970325	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T		C	T	T	C	T	C	C	T
ss149072746	ENSMUSSNP5335539	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T						C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32385255					SNP	T	C	T	T	T	T	T	T	C	T	T	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51478216	NES13970325	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43088878 () rs orientation: forward

Symbol	Name	Function Class
Cldnd2	claudin domain containing 2	1328 bp upstream
Nkg7	natural killer cell group 7 sequence	1208 bp downstream
Tssr66001	transcription start site region 66001	1858 bp downstream
Tssr66002	transcription start site region 66002	1830 bp downstream
Tssr66003	transcription start site region 66003	1367 bp upstream
Tssr66004	transcription start site region 66004	1391 bp upstream