rs32385965 SNP Detail

Summary

• ID
  rs32385965
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:125953224 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTCCTAC GTAAGCAGAA
  GCCTGGTCAT GCTCATTTCA GAAGCCATTT CTAGAAATGT AGGGCCCCAA AATAATATAG
  ATAAGAACGA AAACATGCTT CTTGATTTTG CAAGTGTTGG AAGGGGTTGC AATTGTGAAA
  ATACTTTTGG AAGGCTTATA AAATGCAAAA TTATGCCATG TGTAGTGCAG AGAGAAACGA
  M
  CACCCAAAAC ACGCTGCCAG TCTATCTTAC TTCTCAGCAA ACAACTTTGT TCACCAAATT
  TGCTGGGCTA TTGTATTTGT AGGCAGAGGA GTAAACATTT ATCTAAAGGA CAACTGAACA
  CTAATGAAAG CTCGATTTCC TCCCAACAGC TTATGTCCCC TCCATTGATG TTAAACAGGC
  ACATTCAGAT GGTGTGTCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45641473	mCV22610549	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C	C
ss147405244	ENSMUSSNP2287139	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32385965					SNP	C	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:125953224 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14805	CpG island 14805	519 bp distal
Gm68683	predicted gene, 68683	933 bp upstream
Oscp1	organic solute carrier partner 1	within coordinates
Rr99993	regulatory region 99993	within coordinates
Rr398485	regulatory region 398485	738 bp downstream
Tssr1297	transcription start site region 1297	796 bp downstream
Tssr38971	transcription start site region 38971	1477 bp downstream
Tssr38972	transcription start site region 38972	818 bp downstream
Tssr38973	transcription start site region 38973	807 bp downstream
Tssr38974	transcription start site region 38974	771 bp downstream
Tssr43347	transcription start site region 43347	995 bp upstream