rs32388233 SNP Detail

Summary

• ID
  rs32388233
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:125995891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTATAACC ATTAGatata tatactatat
  atagtgtata tactatatac tatatataca gcacataaaa tatatgtata catatataAT
  TCATCATAGA AAACGGTACA TATATTGTTT ATCCTACAAT ACtaaatatt atatatctag
  Y
  atatgtatat actggattat atatataaat gtattatatg aacatgtact atatatgcaa
  tatattctgt aaaaatgtgt atatacatac aGTTCATTAT ATAAACAATG CATTCGATAG
  ACAACTGCTT AAGCATAAAT TCTCCATACT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45141675	mCV22278554	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss319959147	CHEV_1_127964731	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32388233					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:125995891 () rs orientation: forward

Symbol	Name	Function Class
Gm35562	predicted gene, 35562	within coordinates
Gm37936	predicted gene, 37936	1986 bp downstream
Nckap5	NCK-associated protein 5	within coordinates