rs32390621 SNP Detail

Summary

• ID
  rs32390621
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:176539430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGA ATAGAGCTTG CCAAAAAAAA
  M
  CGCATTTGCT TTCATACAAC ATATT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45142148	mCV25116249	ABI	CRAMUS_MOUSE	f	SNP	C	A					C	C
ss46702073	NES10690985	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	C	C	C		C	A	C	C	C	A	C	C
ss146339970	ENSMUSSNP5742515	ENSEMBL	ENSEMBL_Sanger	f	SNP		A						C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32390621					SNP	C	A	A	C	C	C	C	C	A	C	C	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46702073	NES10690985	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:176539430 () rs orientation: forward

Symbol	Name	Function Class
Rr396622	regulatory region 396622	701 bp upstream
Rr423899	regulatory region 423899	623 bp proximal
Rr423900	regulatory region 423900	712 bp proximal