rs32391471 SNP Detail

Summary

• ID
  rs32391471
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:33703293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTGACTCAGC ACATTTCTTA ATTCACTCTC CAGGATCATT ACTGGGTTAT CAACTCAACC
  AGGTGAAACT AAGAACTATA CTACCTCAGT GAAAGCTCCT GAGCAGGGGC GGCAACTGCC
  TTCCATCAGT CACTGCTCTT AACTTCCCTA TACCCAGGAT GCTCACCCTC TCAACCAGTT
  CTACAAATCA ACCCTCAGCT TCTTTCAACT GTTCTAAGTA TAGACAAAAA ACCATACACA
  TATATACATA CATACATACA CATATATGTA TGTATGTATA TATAATTTTA TATAATATAT
  W
  TATTTATTTA TTTATTTATT TATTTAAATA CATACACACA CACACACATT CACACAAGTA
  ACCAAAAACT GACTTTGTTC TCAGCACTTA GAGATAGGAC TTTAGAATGT AGTATGTATG
  TGTGTGTGTA TACATATATA TATTATATAT TATATATATA TGCTTACATA ATATACAAGA
  ATACATACAT AAGCATGTAA ATATATAATT GCATACATAT ACATAATTGT TACAGTCAGC
  TTTTGGTTAC TCTTACAAAA TAGGAGAGGT AAGTTATTTA AAAGGATAAA GGTCCAATAA
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45142158	mCV24131950	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss148875593	ENSMUSSNP7033865	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32391471					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:33703293 () rs orientation: forward

Symbol	Name	Function Class
Prim2	DNA primase, p58 subunit	within coordinates
Rr15702	regulatory region 15702	293 bp distal
Rr15703	regulatory region 15703	708 bp proximal
Rr36335	regulatory region 36335	737 bp distal
Rr395983	regulatory region 395983	866 bp downstream