rs32393184 SNP Detail

Summary

• ID
  rs32393184
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:128064810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TATAGATCTG CTTAGCTGCA TACTGAAACC CTACCTGAAT TTACAGGTAC AGTGGGAGAT
  TGGAGGCTGC TTCTCCATGA GCCTAGGAAG GAGAGAGTAA GTCTGAACGA GAAACGGATT
  ATATCCCAAA GTGAAAAAGG AAAGAGCAAC TGGGCGTGGT GGCGCACGCC TTTGATCCCA
  GCACTTGGGA GGCAGAGGCA GGCGAATTTC TGAGTTCGAG GCCAGCGTGG TCTACAGAAT
  GAGTTCCAGG ACAGCCAAGG CTATACACAG CAAATCCTAT CTCGAAAAAG CCAAAAAAAA
  W
  AAAAATTAAT TTTTTTTTTA AAAAAGGAAA GGAAAGAACT TCAGAGAGCT TCAGAAATCT
  ACACAAGTGA AACAAAGGGG TCAGAAAAAA AAATAGGGAA GGGAAGAGGT GGGGAAGGCA
  CCAAGCTCAG CCTCAGCCAT ACAGTTCCCA TCCACTTCCA AAAGGTAAGC CAAATGAAAC
  GCAGGCAGTC CTATACCCAG AACAAGCCCA CAACCCTTGT AAGCCTTAAA TCCAGGTTTG
  ACGCAGCAGT AATTGCCCCA GCAGAAAAAT TCAACAGCAG AGAGAATCTT ATCTTGTCAC
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46140296	mCV24293529	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss145891502	ENSMUSSNP5586482	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32393184					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:128064810 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19791	CpG island 19791	848 bp distal
Gm32816	predicted gene, 32816	within coordinates
Rr368466	regulatory region 368466	1149 bp downstream
Rr656042	regulatory region 656042	997 bp distal
Rr656043	regulatory region 656043	225 bp distal
Rr656044	regulatory region 656044	739 bp distal
Tial1	Tia1 cytotoxic granule-associated RNA binding protein-like 1	1369 bp upstream
Tssr2414	transcription start site region 2414	1891 bp upstream
Tssr69425	transcription start site region 69425	1112 bp downstream
Tssr75110	transcription start site region 75110	1909 bp upstream
Tssr75111	transcription start site region 75111	1760 bp upstream
Tssr75112	transcription start site region 75112	1699 bp upstream
Tssr75113	transcription start site region 75113	1686 bp upstream
Tssr75114	transcription start site region 75114	1526 bp upstream
Tssr75115	transcription start site region 75115	1464 bp upstream
Tssr75116	transcription start site region 75116	1424 bp upstream