rs32396454 SNP Detail

Summary

• ID
  rs32396454
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:52812917 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATG CACAGGGATA AAGATGAAGG
  R
  CAGATTGAGG GAACAGCCCA CCAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45643199	mCV23574325	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	G
ss146315566	ENSMUSSNP6972723	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32396454					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:52812917 () rs orientation: forward

Symbol	Name	Function Class
4930552N02Rik	RIKEN cDNA 4930552N02 gene	1687 bp upstream
Gm69938	predicted gene, 69938	within coordinates
Tssr37282	transcription start site region 37282	1677 bp upstream
Tssr41709	transcription start site region 41709	1600 bp downstream