rs32398837 SNP Detail

Summary

• ID
  rs32398837
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34876576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAACCCCA AGAAAGTGAA
  ACTGCATAAA TAAATAAGTC TACCTGGGGG GTGGGAGGGG GATCAATAAA TAGGCTTCTC
  CATAGGAATA AAGGACATTG GAACACAAAG CCCTCCAGTG CTGTATGATT GACTAAGCAA
  CAGCTTTGGA TTTCTAGTCT CCACATACAG CTTTCATTTT AGATTAGTTC TCTTGCAGGT
  R
  GAATAGCAGG CAGAGAGAGA AGTGCGCACG TTTGTTGTTC TCATCCTTTC AAAACGACAT
  CAGAGTGGAG ACAACTGTAA AGTTTGCTTT TGGGAAATTT ATCTAGGTGT GTACCATCAT
  TTTTGAGTTT TAAAAAATTG TAGAATATAC ATTTTAGGGA TTAAAAAGTA GAATTCCTTC
  AATTCTTGTG GTTGCTTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39398665	mCV23392772	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147562932	ENSMUSSNP1964076	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32398837					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34876576 () rs orientation: forward

Symbol	Name	Function Class
Stk3	serine/threonine kinase 3	within coordinates
Tssr133982	transcription start site region 133982	202 bp upstream
Tssr133983	transcription start site region 133983	89 bp upstream