rs32399995 SNP Detail

Summary

• ID
  rs32399995
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:125871549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCC GCGTGGCCGG AAAGCGGGCG
  R
  GGCATCGTGC GGCTCCCGCG GCGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss46140572	mCV25172295	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss145871769	ENSMUSSNP5680169	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322450385	CHEV_7_133415891	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32399995					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:125871549 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19689	CpG island 19689	within coordinates
Rr368426	regulatory region 368426	476 bp downstream
Rr381444	regulatory region 381444	1327 bp downstream
Rr655453	regulatory region 655453	within coordinates
Sbk1	SH3-binding kinase 1	within coordinates
Tssr69002	transcription start site region 69002	36 bp upstream
Tssr69003	transcription start site region 69003	51 bp upstream
Tssr69004	transcription start site region 69004	67 bp upstream
Tssr69005	transcription start site region 69005	86 bp upstream
Tssr69006	transcription start site region 69006	98 bp upstream
Tssr69007	transcription start site region 69007	129 bp upstream
Tssr69008	transcription start site region 69008	149 bp upstream
Tssr69009	transcription start site region 69009	212 bp upstream
Tssr69010	transcription start site region 69010	407 bp upstream
Tssr69011	transcription start site region 69011	470 bp upstream