rs32400120 SNP Detail

Summary

• ID
  rs32400120
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25955146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATTGACCA AGTGCTATTT
  TGAATGGCTA CTTTAACATA GCGGTGTGAT ATTTTTCCTT GTATGTTCAC TACTTTCAAA
  TAATTTATAT GTTTAAAATA ACTTTAATCA TGATGACATG ACCGACTTCA TTCCAGAGAT
  AAAGAGATGG TTTACCCATA CGCACCACAT ACTTCTCCAC ATGGATAGAC TCAACTAAAG
  Y
  ACTATGGTTA TCTCATTAGA AAAGACTTTG ATAGTATCCT GCATCTCTTC ATTATAAAAT
  CATGGAGAAG TTAGAGGTGC AAGGATAATG CCTCAACATA ACAAAACTTA TGGCCAACAT
  GATACTAAAT GTGGAAAAAC TGATATAATA CCAGTATTAT CAGGAACTAC AGAGAAGTCT
  TCACTCTCTT TAATGGTGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46140375	mCV24588449	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss148607757	ENSMUSSNP3997546	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32400120					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25955146 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r-ps86	vomeronasal 1 receptor, pseudogene 86	95 bp downstream