rs32401655 SNP Detail

Summary

• ID
  rs32401655
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180551624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA ATCAATCTTG TCATGTGACC
  Y
  GTGATAACAG CTTGGACAGT CTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45142364	mCV23508806	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss146385528	ENSMUSSNP2930911	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32401655					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180551624 () rs orientation: forward

Symbol	Name	Function Class
Acbd3	acyl-Coenzyme A binding domain containing 3	1984 bp upstream
Cpgi1116	CpG island 1116	1440 bp proximal
Gm8101	predicted gene 8101	1968 bp downstream
Gm70653	predicted gene, 70653	within coordinates
Rr424552	regulatory region 424552	1036 bp distal
Rr424553	regulatory region 424553	1204 bp proximal
Rr424554	regulatory region 424554	1909 bp proximal
Tssr10483	transcription start site region 10483	1946 bp upstream
Tssr10484	transcription start site region 10484	1960 bp upstream