rs32404025 SNP Detail

Summary

• ID
  rs32404025
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82984466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGCTTGAAGG GGCGGGGCTG GCGCTAAAAC TGGGGCTAAG
  GAGACGGAAG CCGGTGGGGA CGGGAAGGAC CTGGAGGGAA AGTCCTGAGC GGGACGCAAG
  R
  GGCGGGGCGT GAGCTTCTGA GTCCTTCCAG TTCCTGTGAC CTCCTCAGCG AGGAGTGACA
  GCCTCACCGA CCAGAGCAAT GGGTGAAAAT GTCCCTCAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39399373	mCV22803370	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss148234865	ENSMUSSNP6929834	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32404025					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82984466 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7437	CpG island 7437	within coordinates
Gm17206	predicted gene 17206	1807 bp downstream
Rr308146	regulatory region 308146	1735 bp proximal
Rr312184	regulatory region 312184	within coordinates
Rr404540	regulatory region 404540	within coordinates
Serhl	serine hydrolase-like	within coordinates
Tssr132408	transcription start site region 132408	55 bp downstream
Tssr132409	transcription start site region 132409	16 bp upstream
Tssr132410	transcription start site region 132410	41 bp upstream