rs32404589 SNP Detail

Summary

• ID
  rs32404589
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140843520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCCC AGCCAGAAGC CCCTGAACCT
  K
  AAAATCAACC CATGGTTGAG GCTGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45643828	mCV23727162	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
ss147725873	ENSMUSSNP124362	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32404589					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140843520 () rs orientation: forward

Symbol	Name	Function Class
4921514A10Rik	RIKEN cDNA 4921514A10 gene	within coordinates
Rr603650	regulatory region 603650	1144 bp distal
Rr603651	regulatory region 603651	539 bp distal
Szrd1	SUZ RNA binding domain containing 1	within coordinates
Tssr44297	transcription start site region 44297	918 bp upstream
Tssr44298	transcription start site region 44298	816 bp upstream
Tssr44299	transcription start site region 44299	540 bp upstream