rs32408617 SNP Detail

Summary

• ID
  rs32408617
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:101939629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTT TTTTTCCATT GCTCCCACAC
  Y
  GTAGCCTAGC ATTTGATAGA CAAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss39399968	mCV23291224	ABI	CRAMUS_MOUSE	f	SNP	T	C			T		T
ss52582790	NES15651176	PERLEGEN	MM_PANEL2	f	SNP		C	C	C		C		T	T	T
ss148490987	ENSMUSSNP1983886	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C					T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32408617					SNP	T	C	C	C	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52582790	NES15651176	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:101939629 () rs orientation: forward

Symbol	Name	Function Class
D15Mit40	DNA segment, Chr 15, Massachusetts Institute of Technology 40	1753 bp distal
Krt18	keratin 18	within coordinates
Rr308983	regulatory region 308983	1453 bp proximal
Rr311450	regulatory region 311450	1028 bp distal
Tssr133315	transcription start site region 133315	1301 bp downstream