rs32410664 SNP Detail

Summary

• ID
  rs32410664
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129228264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAA AAATTAAAAT ATATGAACTA
  Y
  CAAAAATATT CAAGATTCGC GTCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45644916	mCV22716918	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss147438507	ENSMUSSNP6600141	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss321312034	CHEV_4_129011715	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32410664					SNP	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129228264 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14889	CpG island 14889	135 bp proximal
Rbbp4	retinoblastoma binding protein 4, chromatin remodeling factor	within coordinates
Rr367701	regulatory region 367701	888 bp upstream
Rr367702	regulatory region 367702	1336 bp upstream
Rr600200	regulatory region 600200	850 bp proximal
Rr600201	regulatory region 600201	889 bp proximal
Tssr39141	transcription start site region 39141	1122 bp upstream
Tssr39142	transcription start site region 39142	1491 bp upstream
Tssr39143	transcription start site region 39143	1545 bp upstream
Tssr43492	transcription start site region 43492	772 bp downstream
Tssr43493	transcription start site region 43493	826 bp downstream
Tssr43494	transcription start site region 43494	853 bp downstream
Zbtb8os	zinc finger and BTB domain containing 8 opposite strand	1061 bp upstream