rs32414719 SNP Detail

Summary

• ID
  rs32414719
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19296451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCCC CCACAAGCCA AGCTGTCAAC
  M
  GTCAGGCTCC CGCACATTCG TCACA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss48163332	NES11822852	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A		A	A	A	A
ss322117456	CHEV_7_20147875	CHEVERUD	SCREENING_POP	f	SNP							A					C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs32414719					SNP	A	A	A	A	C	A	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48163332	NES11822852	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19296451 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18499	CpG island 18499	within coordinates
Ppp1r37	protein phosphatase 1, regulatory subunit 37	within coordinates
Rr643188	regulatory region 643188	19 bp distal
Rr643189	regulatory region 643189	540 bp proximal
Tssr70928	transcription start site region 70928	360 bp upstream
Tssr70929	transcription start site region 70929	329 bp upstream
Tssr70930	transcription start site region 70930	278 bp upstream
Tssr70931	transcription start site region 70931	125 bp upstream
Tssr70932	transcription start site region 70932	89 bp upstream