rs32415102 SNP Detail

Summary

• ID
  rs32415102
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131646562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGTC AGAGGACAGG CAGGCTGATG
  K
  CGAGCACTTT GCTCCAGGTG TTCAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss45645321	mCV22587447	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss147471964	ENSMUSSNP1735082	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
ss321329092	CHEV_4_131475166	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs32415102					SNP	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131646562 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14947	CpG island 14947	460 bp proximal
Gm12992	predicted gene 12992	within coordinates
Gm50475	predicted gene, 50475	1565 bp downstream
Rr85750	regulatory region 85750	1962 bp distal
Rr85751	regulatory region 85751	1362 bp distal
Rr100128	regulatory region 100128	within coordinates
Tmem200b	transmembrane protein 200B	1949 bp upstream
Tssr39357	transcription start site region 39357	1317 bp upstream
Tssr39358	transcription start site region 39358	1899 bp upstream
Tssr39359	transcription start site region 39359	1947 bp upstream
Tssr43616	transcription start site region 43616	1451 bp downstream
Tssr43617	transcription start site region 43617	1768 bp downstream