rs32415995 SNP Detail

Summary

• ID
  rs32415995
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19297716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATCTCTGG CTCCTCCTGC
  CTCTACACCC CCTTCCCCAC ACCAAATGCT GGGATTACAG ACTTGGGTCA CTGTGCTTAG
  CTAGGAACTG CTTCCAGATA TCATGTACTG AAAGATTTCT AGTGACAAGG GGCTGAAACA
  GGGGACACAG ACTCCCTCAC TAGACGGCTA GAGCAAACTG AGGAAGGGTA AAACTTCAAC
  R
  CTAACCACCA ACCTGCAGCA TTTGCTCCCG GGCACTGGCA CGGCACTGGC ACACAAGTGT
  GACCACCACC ACCACTCCCA GTCCCCTCCG TGGGAAGACA AACCTGCAGG TGACTGCAGT
  GGACCACATC ACCAAGAGGG AACCTTGAAA CCTAGTGTAA GCCAAGGCCC TGTCTAGGCC
  TTTTCTAGTA AAAAGCCATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48163340	NES11822656	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32415995					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48163340	NES11822656	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19297716 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18499	CpG island 18499	982 bp distal
Gemin7	gem nuclear organelle associated protein 7	1158 bp downstream
Ppp1r37	protein phosphatase 1, regulatory subunit 37	715 bp upstream
Rr643188	regulatory region 643188	1284 bp distal
Rr643189	regulatory region 643189	225 bp distal
Rr643190	regulatory region 643190	776 bp proximal
Rr643191	regulatory region 643191	860 bp proximal
Tssr70928	transcription start site region 70928	1625 bp upstream
Tssr70929	transcription start site region 70929	1594 bp upstream
Tssr70930	transcription start site region 70930	1543 bp upstream
Tssr70931	transcription start site region 70931	1390 bp upstream
Tssr70932	transcription start site region 70932	1354 bp upstream