rs32418580 SNP Detail

Summary

• ID
  rs32418580
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:119350291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCTGCCCC AATCCTGGCC
  TGCAGCCTGG CTGGGAGATG GAGGCAGTTG GGTCTTAGCA ACCAGATACT TCATTTAGAT
  AATTCGAAGA TCCTTTTCCT TTTCTTACAC CCCAGTTTGC ACCAGCGCTT GACCATCATA
  ACCCCAGTGT CATAAAAACA GGTTAAGACC CCCATATTGA GTTAGGGGAA CCCCTAGGGC
  R
  CGTTTTTTCC TCCTAGTCCA CACCCCACTT CCCCTCCGCC CTCCAACTCA GTCCTCTGTA
  CATACTGTCC GTGGTCCTAG CCGTTTGCAA ATTCTGCCCG CAAACAATAG CGTGAAACCT
  GGTATTCGGT TCTTGAAAAT AAATTAATTA TACATTTATT TATGTATGTA TTTATGTATT
  TATTTATTTA TGTATTTATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss45645654	mCV24267324	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs32418580					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119350291 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14703	CpG island 14703	within coordinates
Rimkla	ribosomal modification protein rimK-like family member A	496 bp upstream
Rr598598	regulatory region 598598	within coordinates
Tssr43121	transcription start site region 43121	533 bp upstream
Tssr43122	transcription start site region 43122	476 bp upstream