rs32419468 SNP Detail

Summary

• ID
  rs32419468
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:131671943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTGCCCGC TGCCCAGACA CACCTGCAGC
  CCTGCCCAGC CGGCTCTGCT CACCCAGAGG TAAGCCCCAC CCAGCCCAAC CCACCCAAGG
  GCTGGGGGTT ATCCAGGGAA GAGAGCAGGC CCCAGGGGTA CCTTCAGAAG AGAGATGACG
  K
  GGTGGGGGCT TAGGAACCTG AGTACACATG GGAAGGACGT TCTGAACCGG ATCCTATGAG
  CAGCCCTCCA GTCCTTGTGG AGCGCACCAT AAAGACCTCA GCTGCTAGGG TGAGTTTCAC
  TGGAAGAATA CACAGAATGG ACTCTATTGG                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45145631	mCV23265307	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	G
ss145481806	ENSMUSSNP5955623	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		G
ss319975139	CHEV_1_133640782	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32419468					SNP	G	T	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:131671943 () rs orientation: forward

Symbol	Name	Function Class
Rr28486	regulatory region 28486	within coordinates
Slc26a9	solute carrier family 26, member 9	within coordinates
Tssr8660	transcription start site region 8660	176 bp downstream
Tssr8661	transcription start site region 8661	10 bp downstream