rs32420383 SNP Detail

Summary

• ID
  rs32420383
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:133854309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCT CAGCTGGGTC AGGGGAGCCT
  Y
  AATGGGGGCG AGGCCTCTGA AGACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45646223	mCV24805086	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss147518512	ENSMUSSNP2840060	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
ss321345446	CHEV_4_133682913	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32420383					SNP	T	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:133854309 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15028	CpG island 15028	1254 bp proximal
Gm68742	predicted gene, 68742	1945 bp downstream
Rr601575	regulatory region 601575	1731 bp proximal
Sh3bgrl3	SH3 domain binding glutamic acid-rich protein-like 3	408 bp downstream
Tssr39535	transcription start site region 39535	537 bp upstream
Tssr39536	transcription start site region 39536	620 bp upstream
Tssr39537	transcription start site region 39537	910 bp upstream
Tssr43866	transcription start site region 43866	629 bp downstream
Tssr43867	transcription start site region 43867	689 bp downstream
Tssr43868	transcription start site region 43868	725 bp downstream
Tssr43869	transcription start site region 43869	800 bp downstream
Tssr43870	transcription start site region 43870	953 bp downstream
Tssr43871	transcription start site region 43871	1001 bp downstream
Tssr43872	transcription start site region 43872	1031 bp downstream
Tssr43873	transcription start site region 43873	1054 bp downstream
Tssr43874	transcription start site region 43874	1084 bp downstream
Tssr43875	transcription start site region 43875	1682 bp downstream
Tssr43876	transcription start site region 43876	1709 bp downstream
Ubxn11	UBX domain protein 11	214 bp downstream