rs32420693 SNP Detail

Summary

• ID
  rs32420693
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136146998 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CACTGTCCC CAAGACCTGT ATTTCCTTAT
  AGGTcagtgg ctctaaacct tcctaatgct gcgacccttt aatacagttc ctcatattct
  agtgaccccc taactgcaag atcatttttg ttgctacttc ataaccataa ttttgccact
  R
  ttattacttg taatataaat atctgtggtt ttcgatggtc taatgcaacc cctgtgaaat
  ggtcattagg ctccctcccc caaaggaatc gtgacccaca ggttgagaac cactgCTATA
  GGAGATTGTA tgtttacagc aatgttacag                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45145373	mCV24740049	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss145554240	ENSMUSSNP6160	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss319995082	CHEV_1_138115837	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32420693					SNP	G	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136146998 () rs orientation: forward

Symbol	Name	Function Class
Gm26568	predicted gene, 26568	within coordinates
Inava	innate immunity activator	within coordinates
Tssr229	transcription start site region 229	1124 bp downstream
Tssr9051	transcription start site region 9051	1470 bp upstream