rs32421495 SNP Detail

Summary

• ID
  rs32421495
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:65139084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAA AAGGCTATTT GGCTTATGAA
  S
  TTCTTTGGAT TCTGCTTCTG TGTCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45145375	mCV24808398	ABI	CRAMUS_MOUSE	f	SNP	G		C
ss149170471	ENSMUSSNP2075858	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
ss319746472	CHEV_1_65146499	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32421495					SNP	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:65139084 () rs orientation: forward

Symbol	Name	Function Class
Cryga	crystallin, gamma A	468 bp downstream
Gm28845	predicted gene 28845	694 bp downstream
Tssr102	transcription start site region 102	723 bp upstream
Tssr7112	transcription start site region 7112	468 bp upstream
Tssr7113	transcription start site region 7113	583 bp upstream
Tssr7114	transcription start site region 7114	593 bp upstream
Tssr7115	transcription start site region 7115	609 bp upstream
Tssr7116	transcription start site region 7116	670 bp upstream
Tssr7117	transcription start site region 7117	698 bp upstream
Tssr7118	transcription start site region 7118	728 bp upstream
Tssr11968	transcription start site region 11968	498 bp downstream
Tssr11969	transcription start site region 11969	528 bp downstream
Tssr11970	transcription start site region 11970	702 bp downstream
Tssr11971	transcription start site region 11971	725 bp downstream
Tssr11972	transcription start site region 11972	747 bp downstream