rs32424827 SNP Detail

Summary

• ID
  rs32424827
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:23472983 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TTAAGAAAAC ATGTGCATAC
  R
  TTTCTATAAC AAAGCTTAAC CTAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39401288	mCV25246716	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss147318271	ENSMUSSNP4546753	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss324891311	CHEV_15_23402652	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32424827					SNP	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:23472983 () rs orientation: forward

Symbol	Name	Function Class
Cdh18	cadherin 18	within coordinates
Cpgi6966	CpG island 6966	1065 bp proximal
Gm56739	predicted gene, 56739	1530 bp upstream
Rr499807	regulatory region 499807	1606 bp distal
Tssr130794	transcription start site region 130794	1557 bp upstream