rs32427320 SNP Detail

Summary

• ID
  rs32427320
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:3398327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTA ATGGTTTCTT CAGGCTATCC
  A
  TGCTTCTAAA AGGCTTGCAC AAACC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss132926209	ENSMUSSNP5726805	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss321724840	CHEV_6_3348327	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32427320					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:3398327 () rs orientation: forward

Symbol	Name	Function Class
Rr134883	regulatory region 134883	1274 bp proximal
Rr146111	regulatory region 146111	1926 bp distal
Rr146113	regulatory region 146113	within coordinates
Rr146114	regulatory region 146114	1473 bp proximal
Rr378834	regulatory region 378834	768 bp downstream
Rr399551	regulatory region 399551	1066 bp upstream
Samd9l	sterile alpha motif domain containing 9-like	within coordinates
Tssr59689	transcription start site region 59689	974 bp downstream
Tssr59690	transcription start site region 59690	1124 bp downstream
Tssr59691	transcription start site region 59691	1218 bp downstream