rs32427361 SNP Detail

Summary

• ID
  rs32427361
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:102124071 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGTAATGAC CCAGGGTAAA
  GGCACAGTGT GTAACAAGCA TCCTGCCTTC CGCATGAGGG TGTTGCCGCA AAGTCGGTAG
  AAATCAACGT GCTATTAATA CAACAGTGTG TACTCTTGGC ATACAGTATA TGACGGCCAA
  CTCTTGATCA CACATTCTCT AGGGAGGGGA CGAGCCACTG TGGATAATGG AATTAGAAAG
  Y
  TGGTACAAGG AGCGGTGCCC AGGCCTAGGC TGGGAGGTAC ACTTGATCTT AGTTGTAGGT
  CAATGACTTG ACCTTGATAG TATTCACTCT TCCTGGGAGT ATAGCCTCGT GTTTCTTTAG
  ATGATACTCC AGGAAAGTCA GAGACTAGTT TTGAATATTT GTCTTGTTTG TAATACTCCC
  TTCCATCGCT CCTAAAATAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49352268	NES12571114	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32427361					SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49352268	NES12571114	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:102124071 () rs orientation: forward

Symbol	Name	Function Class
Gm52170	predicted gene, 52170	1793 bp upstream
Lmo7	LIM domain only 7	within coordinates
Tssr126931	transcription start site region 126931	250 bp upstream
Tssr126932	transcription start site region 126932	834 bp upstream