rs32427362 SNP Detail

Summary

• ID
  rs32427362
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:102124004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAGACACC TTCTCTGACT
  GCTTCTGCTG CTACTTTAAC CTAGACCCGG AGTACCGAGT CATGGGAACG TAATGACCCA
  GGGTAAAGGC ACAGTGTGTA ACAAGCATCC TGCCTTCCGC ATGAGGGTGT TGCCGCAAAG
  TCGGTAGAAA TCAACGTGCT ATTAATACAA CAGTGTGTAC TCTTGGCATA CAGTATATGA
  Y
  GGCCAACTCT TGATCACACA TTCTCTAGGG AGGGGACGAG CCACTGTGGA TAATGGAATT
  AGAAAGTTGG TACAAGGAGC GGTGCCCAGG CCTAGGCTGG GAGGTACACT TGATCTTAGT
  TGTAGGTCAA TGACTTGACC TTGATAGTAT TCACTCTTCC TGGGAGTATA GCCTCGTGTT
  TCTTTAGATG ATACTCCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49352269	NES12571112	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32427362					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49352269	NES12571112	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:102124004 () rs orientation: forward

Symbol	Name	Function Class
Gm52170	predicted gene, 52170	1860 bp upstream
Lmo7	LIM domain only 7	within coordinates
Tssr126931	transcription start site region 126931	317 bp upstream
Tssr126932	transcription start site region 126932	901 bp upstream