rs32427363 SNP Detail

Summary

• ID
  rs32427363
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:102123981 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGAGCTAC CTGCTTGTGG
  CTGACCAGAC ACCTTCTCTG ACTGCTTCTG CTGCTACTTT AACCTAGACC CGGAGTACCG
  AGTCATGGGA ACGTAATGAC CCAGGGTAAA GGCACAGTGT GTAACAAGCA TCCTGCCTTC
  CGCATGAGGG TGTTGCCGCA AAGTCGGTAG AAATCAACGT GCTATTAATA CAACAGTGTG
  Y
  ACTCTTGGCA TACAGTATAT GACGGCCAAC TCTTGATCAC ACATTCTCTA GGGAGGGGAC
  GAGCCACTGT GGATAATGGA ATTAGAAAGT TGGTACAAGG AGCGGTGCCC AGGCCTAGGC
  TGGGAGGTAC ACTTGATCTT AGTTGTAGGT CAATGACTTG ACCTTGATAG TATTCACTCT
  TCCTGGGAGT ATAGCCTCGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss49352270	NES12571111	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32427363					SNP	T	T	T	T	T	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49352270	NES12571111	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:102123981 () rs orientation: forward

Symbol	Name	Function Class
Gm52170	predicted gene, 52170	1883 bp upstream
Lmo7	LIM domain only 7	within coordinates
Tssr126931	transcription start site region 126931	340 bp upstream
Tssr126932	transcription start site region 126932	924 bp upstream