rs32428305 SNP Detail

Summary

• ID
  rs32428305
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:102123745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCCTTGTC ACTTCTCGGC
  AGAAGGAATT CTGACTCTGA GAATGAGGAT TCGGGCTCTT TCCAAAGCTC CACCATTTTC
  AGTAGACTAG AAAAGGCAGA CCATAGGTTA GACAGCAGCT ACCAAAGACC TTCACTCTTG
  CTGGAGCTAG CTACCAAACA CGCTATGAGG TCACGTGACA CCCATGCAGC CAGGAGGACC
  R
  GCAGTGCTTT GCAGGAATCC AGGTGCACCT GTCTGCATGA GCTACCTGCT TGTGGCTGAC
  CAGACACCTT CTCTGACTGC TTCTGCTGCT ACTTTAACCT AGACCCGGAG TACCGAGTCA
  TGGGAACGTA ATGACCCAGG GTAAAGGCAC AGTGTGTAAC AAGCATCCTG CCTTCCGCAT
  GAGGGTGTTG CCGCAAAGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49352273	NES12571104	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32428305					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49352273	NES12571104	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:102123745 () rs orientation: forward

Symbol	Name	Function Class
Lmo7	LIM domain only 7	within coordinates
Tssr126930	transcription start site region 126930	1982 bp downstream
Tssr126931	transcription start site region 126931	576 bp upstream
Tssr126932	transcription start site region 126932	1160 bp upstream