rs32428919 SNP Detail

Summary

• ID
  rs32428919
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:126361413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACTTTCCT AAGGCCTATC TTCTGAGAGA AGTAGCTCAT
  AAAGCAAGGC TTTGGTCCCC GTCCATCCTC ATGCAGCAGA AAATGCACTC TGGCAGTTGA
  S
  CTCGACCCTT TCTTTGACAA ACTGCTACTC CGGGGTTTAA GGACCAAGTG TCAGAGACCG
  CCCCCCACCC TTCCCCCAAG ACAGAAGGCA ATTCCCATT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45647262	mCV25174271	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	G
ss321300076	CHEV_4_126144864	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32428919					SNP	C	C	C	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:126361413 () rs orientation: forward

Symbol	Name	Function Class
Ago1	argonaute RISC catalytic subunit 1	within coordinates
Cpgi14821	CpG island 14821	196 bp proximal
Rr377145	regulatory region 377145	793 bp downstream
Rr398490	regulatory region 398490	914 bp upstream
Rr599694	regulatory region 599694	841 bp distal
Rr599695	regulatory region 599695	within coordinates
Rr599696	regulatory region 599696	478 bp proximal
Rr599697	regulatory region 599697	791 bp proximal
Rr599698	regulatory region 599698	1119 bp proximal
Tssr39001	transcription start site region 39001	1458 bp downstream
Tssr43383	transcription start site region 43383	960 bp downstream
Tssr43384	transcription start site region 43384	1076 bp downstream