rs32429755 SNP Detail

Summary

• ID
  rs32429755
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135872502 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGG GATGCGAGTG GCTGCCCTGC
  K
  CACTCTGCCA AGGCAGCATA AGAGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45647434	mCV25111152	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss147559876	ENSMUSSNP5749391	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32429755					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135872502 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi15098	CpG island 15098			37 bp distal
Gm57159	predicted gene, 57159			148 bp upstream
Gm68296	predicted gene, 68296			1996 bp upstream
Id3	inhibitor of DNA binding 3			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
Rr377254	regulatory region 377254			988 bp upstream
Rr398607	regulatory region 398607			1274 bp downstream
Rr602285	regulatory region 602285			1684 bp distal
Rr602286	regulatory region 602286			within coordinates
Rr602287	regulatory region 602287			1506 bp proximal
Tssr39667	transcription start site region 39667			1359 bp downstream
Tssr39668	transcription start site region 39668			387 bp downstream