rs32430282 SNP Detail

Summary

• ID
  rs32430282
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:102119789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATACCCAAA CTAAATTCCT
  TTAGAGTCGT GATAGTAGAA AAATGTGAAT GGCTTAGTGT TAACCTTTGT AACTGTCACT
  GTCTTTACTG AGGTGTGACT CTTTTAGAGT CCAGATGAAG ATGCTCACAC CTACAAGGAA
  GCCAATCTAA GTTTATAGTT CATCGGAGTA ATCACAGTTA TAAACGAAGC CTGAAAAATC
  Y
  TCAACCTACT GTGTTCTGTT GTCCTGACCG GGGAGACTAT GGAATGCTTT GTTTGAATTT
  ATATCTACTT GTCAAAGTAT AGCAGAGAGA AAGAAAGGTT GTGGGTTTGT GGCAAGTGTA
  GATTTATCAT CAAAACGTAC AGACCGACTG GTGTAAGGTC AACTCCTCCT TTATATGTGA
  CCTATTCCTG GTGTGTGTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49352306	NES12571469	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	T	T	T	T	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32430282					SNP	C	T	T	T	T	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49352306	NES12571469	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:102119789 () rs orientation: forward

Symbol	Name	Function Class
Lmo7	LIM domain only 7	within coordinates
Rr296718	regulatory region 296718	1211 bp proximal
Tssr126927	transcription start site region 126927	1685 bp upstream
Tssr126928	transcription start site region 126928	1693 bp upstream
Tssr126929	transcription start site region 126929	1774 bp upstream
Tssr126930	transcription start site region 126930	1961 bp upstream