rs32431942 SNP Detail

Summary

• ID
  rs32431942
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:138801540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGGTGTGG CTGAAAGGAT AAGGAGGCAA GGGGCTCCAA
  GTCCCTTCTC AGTTTATTAG TTACTCCTCC CACCGCTGTG ATAAAACATC CTGACCGAAG
  S
  AGCTTAAGGG AGGAAGGTGT ATTTTGGCTC ACAGTTCACA GGTTCATGGC AGGCGGGTAA
  CTGAAGGTCT TGGGAGGCCA CATTGTGCCC ACAGTCAAG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46144674	mCV23697219	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss145976097	ENSMUSSNP910167	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss322467806	CHEV_7_146407523	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32431942					SNP	C	C	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:138801540 () rs orientation: forward

Symbol	Name	Function Class
Lrrc27	leucine rich repeat containing 27	within coordinates
Rr657519	regulatory region 657519	984 bp distal
Rr657520	regulatory region 657520	166 bp proximal
Tssr69706	transcription start site region 69706	1005 bp downstream