rs32432561 SNP Detail

Summary

• ID
  rs32432561
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27836733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTTGCGTG TGCACCAGAG
  TGGAACACGA GGTGTGCTAG AACTGGACTT TGGGCTGGTG GTCACCTATG ACTGGGATGG
  CCAGCTGACC CTGAGCCTGC CCAAGCGCTT CCAAGACCAG GTGTCTGGGC TGTGCGGCAA
  CTATAATGGA GACCCTGCAG ATGACTTCCT CACGCCTGAT GGGAAGCAAG CTCCTGATGT
  Y
  CTAAATTTCA CCAAAAGCTG GAAGGTGAAT GATCAAGACC TCTTATGTGA TGATGGCTGT
  TATGGCAACT GTCCGTCTTG CATCCCAAGC CAGGCCCAGC TCTTTAAGAA AGACCTTTTC
  TGTGGCATGC TAACTCTGCC CTCAGGCCCA TTTGCTGACT GTCATCAATT TCTGGACCCC
  AAGCCTTTCC TGGAAGAATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46144581	mCV25404679	ABI	CRAMUS_MOUSE	f	SNP	C	T					T		T
ss51887445	NES14907465	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	T	T		T	T	T	T	C	T	C	C	C
ss148632150	ENSMUSSNP802282	ENSEMBL	ENSEMBL_Sanger	f	SNP		T							T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32432561					SNP	C	T	T	T	T	T	T	T	T	T	T	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51887445	NES14907465	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27836733 () rs orientation: forward

Symbol	Name	Function Class
Fcgbpl1	Fc fragment of IgG binding protein like 1	within coordinates
Gm21925	predicted gene, 21925	within coordinates
Gm38976	predicted gene, 38976	within coordinates
Rr644170	regulatory region 644170	423 bp proximal
Rr644171	regulatory region 644171	504 bp proximal
Tssr65386	transcription start site region 65386	197 bp downstream
Tssr65387	transcription start site region 65387	125 bp upstream
Tssr65388	transcription start site region 65388	222 bp upstream
Tssr65389	transcription start site region 65389	278 bp upstream
Tssr71448	transcription start site region 71448	201 bp upstream
Tssr71449	transcription start site region 71449	188 bp upstream
Tssr71450	transcription start site region 71450	176 bp upstream
Tssr71451	transcription start site region 71451	210 bp downstream