rs32433007 SNP Detail

Summary

• ID
  rs32433007
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44397238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAAATAAT AGATACAAAT
  AATCTTTCCT TTTAAATTTG TTTATGACTG CTTCAAAGTG CTATGTGTGT ACACCTAAGT
  GCCTTTAGAA GCCCAAGAGG GGGTTTGATA CCCCGAAACT GAAGCAATAG ATGTCTCTGG
  GCCATTATTG TAGGTATTGG TCGCGAGAGG AAACCCCCGC TTAAGAGCCG GGCCTACGCC
  S
  GGCTGTGAGC ACTCAAGGGT TCAGCATTCT GTCAGGGCCT CCCACCCCGG CCACAGAGGA
  CTAAGGCCAT GGGCGCCTGG GCTTAGTCTC CGTACCTCGG CATGGCTCCG TGTCTCCGTA
  CCTCAGCATG GCTGGCAACC CAAAGAACAT ATGCTTTCCA GGATCCCAAG AAAACCCAAC
  TCCTCATGAG GAGGGCTCCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46145501	mCV27580301	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	C
ss149120965	ENSMUSSNP7028394	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32433007					SNP	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44397238 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18993	CpG island 18993	570 bp proximal
Rr400296	regulatory region 400296	481 bp upstream
Tssr66420	transcription start site region 66420	689 bp upstream
Tssr66421	transcription start site region 66421	788 bp upstream
Tssr66422	transcription start site region 66422	826 bp upstream
Tssr66423	transcription start site region 66423	1092 bp upstream
Tssr66424	transcription start site region 66424	1174 bp upstream
Vrk3	vaccinia related kinase 3	811 bp upstream
Zfp473	zinc finger protein 473	within coordinates